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- Stephodinium australicum
- Stephodinium coronatum
- Stephodinium daveyi
- Stephodinium dianneae
- Stephodinium europaicum
- Stephodinium parvum
- Stephodinium pellucidum
- Stephodinium spiniferum
- Stephodinium spinosum
- Stephodinium spinulosum
- Stevens, 1987
- Stevens and Helby, 1987
- Stigma
- Stiphrosphaeridium
- Stiphrosphaeridium anthophorum
- Stiphrosphaeridium arbustum
- Stiphrosphaeridium dictyophorum
- Stiphrosphaeridium sarjeantii
- Stockmans and Willière, 1960
- Stockmans and Willière, 1962a
- Stockmans and Willière, 1962b
- Stockmans and Willière, 1963
- Stockmans and Willière, 1969
- Stokes, 1887
- Stomiosphaera
- Stomiosphaera acculeata
- Stomiosphaera alpina
- Stomiosphaera asdadensis
- Stomiosphaera betica
- Stomiosphaera borzae
- Stomiosphaera cardiiformis
- Stomiosphaera carpathica
- Stomiosphaera colomii
- Stomiosphaera conoidea
- Stomiosphaera diffringens
- Stomiosphaera echinata
- Stomiosphaera fibrata
- Stomiosphaera fusca
- Stomiosphaera fusca subsp. misolensis
- Stomiosphaera heliosphaera
- Stomiosphaera lapidosa
- Stomiosphaera leporis
- Stomiosphaera malmica
- Stomiosphaera minutissima
- Stomiosphaera misolensis
- Stomiosphaera moluccana
- Stomiosphaera moretii
- Stomiosphaera orbulinaria
- Stomiosphaera polygona
- Stomiosphaera pulla